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Saturday, May 22, 2021

Biological Physics Topic Alert

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Topic Alert

May 2021

Biological Physics

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Every Life on Fire: How Thermodynamics Explains the Origins of Living Things 

Harvey S. Leff

American Journal of Physics 89, 655 (2021)

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On training targets for deep learning approaches to clean speech magnitude spectrum estimation 

Aaron Nicolson, and Kuldip K. Paliwal

The Journal of the Acoustical Society of America 149, 3273 (2021)

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Influence of seabed on very low frequency sound recorded during passage of merchant ships on the New England shelf 

D. P. Knobles, Preston S. Wilson, Tracianne B. Neilsen, and William S. Hodgkiss

The Journal of the Acoustical Society of America 149, 3294 (2021)

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School-age children benefit from voice gender cue differences for the perception of speech in competing speech   

Leanne Nagels, Etienne Gaudrain, Deborah Vickers, Petra Hendriks, and Deniz Başkent

The Journal of the Acoustical Society of America 149, 3328 (2021)

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Ultrasound based noninvasive real-time cell proliferation process monitoring 

Cemil Keskinoğlu, and Ahmet Aydın

The Journal of the Acoustical Society of America 149, 3345 (2021)

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Contralateral proximal interference 

Adam Reeves, Kumar Seluakumaran, and Bertram Scharf

The Journal of the Acoustical Society of America 149, 3352 (2021)

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Effect of reading passage length on quantitative acoustic speech assessment in Czech-speaking individuals with Parkinson's disease treated with subthalamic nucleus deep brain stimulation 

Petr Krýže, Tereza Tykalová, Evžen Růžička, and Jan Rusz

The Journal of the Acoustical Society of America 149, 3366 (2021)

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Changes in the soundscape of Girona during the COVID lockdown 

Rosa Ma Alsina-Pagès, Pau Bergadà, and Carme Martínez-Suquía

The Journal of the Acoustical Society of America 149, 3416 (2021)

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Photodynamic viral inactivation: Recent advances and potential applications     

Jace A. Willis, Vsevolod Cheburkanov, Giulia Kassab, Jennifer M. Soares, Kate C. Blanco, Vanderlei S. Bagnato, and Vladislav V. Yakovlev

Applied Physics Reviews 8, 021315 (2021)

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Fast SARS-CoV-2 virus detection using disposable cartridge strips and a semiconductor-based biosensor platform     

Minghan Xian, Hao Luo, Xinyi Xia, Chaker Fares, Patrick H. Carey, Chan-Wen Chiu, Fan Ren, Siang-Sin Shan, Yu-Te Liao, Shu-Min Hsu, Josephine F. Esquivel-Upshaw, Chin-Wei Chang, Jenshan Lin, Steven C. Ghivizzani, and Stephen J. Pearton

Journal of Vacuum Science & Technology B 39, 033202 (2021)

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A droplet acoustofluidic platform for time-controlled microbead-based reactions   

Zhenhua Liu, Anna Fornell, and Maria Tenje

Biomicrofluidics 15, 034103 (2021)

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Toward embryo cryopreservation-on-a-chip: A standalone microfluidic platform for gradual loading of cryoprotectants to minimize cryoinjuries     

Pouria Tirgar, Fatemeh Sarmadi, Mojgan Najafi, Parinaz Kazemi, Sina AzizMohseni, Samaneh Fayazi, Ghazaleh Zandi, Nikta Ziaie, Aida Shoushtari Zadeh Naseri, Allen Ehrlicher, and Mojtaba Dashtizad

Biomicrofluidics 15, 034104 (2021)

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Effect of vimentin on cell migration in collagen-coated microchannels: A mimetic physiological confined environment 

Zhiru Zhou, Feiyun Cui, Qi Wen, and H. Susan Zhou

Biomicrofluidics 15, 034105 (2021)

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Molecular diffusion analysis of dynamic blood flow and plasma separation driven by self-powered microfluidic devices 

Sung Oh Woo, Myungkeun Oh, Kyle Nietfeld, Bailey Boehler, and Yongki Choi

Biomicrofluidics 15, 034106 (2021)

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Making quantitative biomicrofluidics from microbore tubing and 3D-printed adapters 

Giraso Keza Monia Kabandana, Adam Michael Ratajczak, and Chengpeng Chen

Biomicrofluidics 15, 034107 (2021)

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Simulation of blood flow past distal arteriovenous-graft anastomosis with intimal hyperplasia 

Luoding Zhu, and Kaoru Sakai

Physics of Fluids 33, 051905 (2021)

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Detrimental effects and mitigation of the joint feature in double shell implosion simulations 

D. J. Stark, J. P. Sauppe, B. M. Haines, S. Palaniyappan, R. F. Sacks, I. Sagert, P. A. Keiter, D. S. Montgomery, T. Morrow, B. M. Patterson, T. E. Quintana, L. Kuettner, L. Goodwin, S. H. Batha, and E. N. Loomis

Physics of Plasmas 28, 052703 (2021)

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Motion and deformation of migrating compound droplets in shear-thinning fluids in a microcapillary tube 

Amirmohammad Sattari, Nishat Tasnim, Pedram Hanafizadeh, and Mina Hoorfar

Physics of Fluids 33, 053106 (2021)

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Immunization of networks with limited knowledge and temporary immunity 

Y. Shang

Chaos 31, 053117 (2021)

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Diffuse reflectance and machine learning techniques to differentiate colorectal cancer ex vivo 

Luís Fernandes, Sónia Carvalho, Isa Carneiro, Rui Henrique, Valery V. Tuchin, Hélder P. Oliveira, and Luís M. Oliveira

Chaos 31, 053118 (2021)

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Temporal-spatial analysis of an age-space structured foot-and-mouth disease model with Dirichlet boundary condition 

Xiaoyan Wang, Hongquan Sun, and Junyuan Yang

Chaos 31, 053120 (2021)

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Modeling synchronization in globally coupled oscillatory systems using model order reduction 

Niccolò Discacciati, and Jan S. Hesthaven

Chaos 31, 053127 (2021)

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Fractional-calculus analysis of the transmission dynamics of the dengue infection 

H. M. Srivastava, Rashid Jan, Asif Jan, Wejdan Deebani, and Meshal Shutaywi

Chaos 31, 053130 (2021)

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Size matters: Effects of the size of heterogeneity on the wave re-entry and spiral wave formation in an excitable media 

Karthikeyan Rajagopal, Shaobo He, Anitha Karthikeyan, and Prakash Duraisamy

Chaos 31, 053131 (2021)

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Hyperscroll dynamics: Vortices in four-dimensional networks   

Franco M. Zanotto, and Oliver Steinbock

Chaos 31, 053132 (2021)

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Intelligent aging compensation scheme for oven-controlled crystal oscillators of batch production based on statistical distribution   

Miao Miao, Zhiqi Li, Yi Zhang, Nana Feng, and Wei Zhou

Review of Scientific Instruments 92, 055106 (2021)

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Design and analysis of shoulder joint exoskeleton rehabilitation mechanism based on gear and rack transmission   

Zaixiang Pang, Tongyu Wang, Junzhi Yu, Zhanli Wang, Shuai Liu, and Xiyu Zhang

AIP Advances 11, 055122 (2021)

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Ultrasound tomography reconstruction algorithm using two opposite rotatable linear arrays for breast cancer diagnosis   

Yijun Cheng, Chang Liu, Chenyang Xue, and Binzhen Zhang

AIP Advances 11, 055124 (2021)

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Quadcopter drones swarm aeroacoustics 

Talib Dbouk, and Dimitris Drikakis

Physics of Fluids 33, 057112 (2021)

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A hybrid recursive regularized lattice Boltzmann model with overset grids for rotating geometries 

H. Yoo, M. L. Bahlali, J. Favier, and P. Sagaut

Physics of Fluids 33, 057113 (2021)

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Surface-enhanced Raman scattering nanotags for bioimaging 

Li Lin, Xinyuan Bi, Yuqing Gu, Fu Wang, and Jian Ye

Journal of Applied Physics 129, 191101 (2021)

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Cross-correlation corrected friction in (generalized) Langevin models 

Viktor Klippenstein, and Nico F. A. van der Vegt

J. Chem. Phys. 154, 191102 (2021)

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Reactive species driven oxidative modifications of peptides—Tracing physical plasma liquid chemistry   

Sebastian Wenske, Jan-Wilm Lackmann, Larissa Milena Busch, Sander Bekeschus, Thomas von Woedtke, and Kristian Wende

Journal of Applied Physics 129, 193305 (2021)

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Speed limits of protein assembly with reversible membrane localization 

Bhavya Mishra, and Margaret E. Johnson

J. Chem. Phys. 154, 194101 (2021)

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Base pair fluctuations in helical models for nucleic acids 

Marco Zoli

J. Chem. Phys. 154, 194102 (2021)

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Programming patchy particles to form three-dimensional dodecagonal quasicrystals 

Daniel F. Tracey, Eva G. Noya, and Jonathan P. K. Doye

J. Chem. Phys. 154, 194505 (2021)

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Amino acid interactions that facilitate enzyme catalysis   

Timothy A. Coulther, Jaeju Ko, and Mary Jo Ondrechen

J. Chem. Phys. 154, 195101 (2021)

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Normal mode analysis of membrane protein dynamics using the vibrational subsystem analysis 

Yan Zhang, She Zhang, Jianhua Xing, and Ivet Bahar

J. Chem. Phys. 154, 195102 (2021)

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Influence of solution ionic strength on the stabilities of M20 loop conformations in apo E. coli dihydrofolate reductase 

C. Satheesan Babu, and Carmay Lim

J. Chem. Phys. 154, 195103 (2021)

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A near analytic solution of a stochastic immune response model considering variability in virus and T-cell dynamics 

Abhilasha Batra, and Rati Sharma

J. Chem. Phys. 154, 195104 (2021)

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Native oxide reconstructions on AlN and GaN (0001) surfaces   

Kelsey J. Mirrielees, J. Houston Dycus, Jonathon N. Baker, Pramod Reddy, Ramón Collazo, Zlatko Sitar, James M. LeBeau, and Douglas L. Irving

Journal of Applied Physics 129, 195304 (2021)

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